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Gilmore Drachmann heeft een update geplaatst 2 weken, 2 dagen geleden
We present accurate ab initio calculations on the structural properties of a gas-phase reaction of possible interest for Saturn’s outer atmosphere chemistry, in which the CH2 molecule has been detected. In the present study, that molecule is made to react with the H- anion to form the CH- species, one considered as a possible intermediate in ionic processes networks. The results indicate that this reaction is markedly exothermic and proceeds with the formation of an intermediate, which occurs via only a shallow barrier below the reagents and progresses directly to the product region. The corresponding rate coefficients of reactions are also computed by making use of the variational transition state theory modeling and found to efficiently lead to the formation of the final anion even at the lower temperatures of interstellar medium conditions.This viewpoint is intended to counterbalance some recent publications describing large-scale virtual screening by illustrating how success in launching drug discovery projects has been achieved with much more modest resources. Two examples of small-scale virtual screening that led to the discovery of clinical candidates are cited in favor of this argument.The assembly of a kinetically trapped daisy chain polymer under redox control has been achieved with a self-complementary monomer using an energy ratchet mechanism. The monomer is composed of a molecular pump at one end and a cyclobis(paraquat-p-phenylene) (CBPQT4+) ring at the other end. The pump and ring are linked together by a long collecting chain. When the monomer is reduced to its radical state, it self-assembles into a supramolecular daisy chain polymer on account of radical-pairing interactions. When all of the bipyridinium radical cations are quickly oxidized to dications, the CBPQT4+ rings are forced to thread onto the collecting chains, forming an out-of-equilibrium, kinetically trapped daisy chain polymer. This polymer can be switched reversibly back to the supramolecular polymer by reduction, followed by depolymerization to afford the monomer as a result of slow oxidation. This proof-of-concept investigation opens up opportunities for synthesizing mechanically interlocked polymers using molecular machines.NMR- and MS-guided metabolomic mining for new phytoconstituents from a widely used dietary supplement, Rhodiola rosea, yielded two new (+)-myrtenol glycosides, 1 and 2, and two new cuminol glycosides, 3 and 4, along with three known analogues, 5-7. The structures of the new compounds were determined by extensive spectroscopic data analysis. Quantum mechanics-driven 1H iterative full spin analysis (QM-HiFSA) decoded the spatial arrangement of the methyl groups in 1 and 2, as well as other features not recognizable by conventional methods, including higher order spin-coupling effects. Expanding applied HiFSA methodology to monoterpene glycosides advances the toolbox for stereochemical assignments, facilitates their structural dereplication, and provides a more definitive reference point for future phytochemical and biological studies of R. rosea as a resilience botanical. Application of a new NMR data analysis software package, CT, for QM-based iteration of NMR spectra is also discussed.Recent surges in mass spectrometry-based proteomics studies demand a concurrent rise in speedy and optimized data processing tools and pipelines. Although several stand-alone bioinformatics tools exist that provide protein-protein interaction (PPI) data, we developed Protein Interaction Network Extractor (PINE) as a fully automated, user-friendly, graphical user interface application for visualization and exploration of global proteome and post-translational modification (PTM) based networks. PINE also supports overlaying differential expression, statistical significance thresholds, and PTM sites on functionally enriched visualization networks to gain insights into proteome-wide regulatory mechanisms and PTM-mediated networks. To illustrate the relevance of the tool, we explore the total proteome and its PTM-associated relationships in two different nonalcoholic steatohepatitis (NASH) mouse models to demonstrate different context-specific case studies. The strength of this tool relies in its ability to (1) perform accurate protein identifier mapping to resolve ambiguity, (2) retrieve interaction data from multiple publicly available PPI databases, and (3) assimilate these complex networks into functionally enriched pathways, ontology categories, and terms. Ultimately, PINE can be used as an extremely powerful tool for novel hypothesis generation to understand underlying disease mechanisms.Cancer cells rely on the enzyme telomerase (EC 2.7.7.49) to promote cellular immortality. Telomerase inhibitors (i.e., azidothymidine) can represent promising antitumor agents, although showing high toxicity when administered alone. Better outcomes were observed within a multipharmacological approach instead. In this context, we exploited the validated antitumor targets carbonic anhydrases (CAs; EC 4.2.1.1) IX and XII to attain the first proof of concept on CA-telomerase dual-hybrid inhibitors. Selleckchem MEK inhibitor Compounds 1b, 7b, 8b, and 11b showed good in vitro inhibition potency against the CAs IX and XII, with KI values in the low nanomolar range, and strong antitelomerase activity in PC-3 and HT-29 cells (IC50 values ranging from 5.2 to 9.1 μM). High-resolution X-ray crystallography on selected derivatives in the adduct with hCA II as a model study allowed to determine their binding modes and thus to set the structural determinants necessary for further development of compounds selectively targeting the tumoral cells.New Dion-Jacobson (n = 3) layered perovskites, A’Cd2Nb3O10 (A’ = Rb, Cs), have been synthesized by a solid-state method. Powder X-ray diffraction measurements confirm the noncentrosymmetric orthorhombic (space group Ima2) structures for both rubidium- and cesium-containing layered oxides. The distorted octahedral coordination of the d0 metal cations (Nb5+) coupled with the increased covalency in the lattice by the introduction of d10 metal cations (Cd2+) is responsible for the acentric structures. The resulting second-harmonic-generation (SHG) efficiencies of the polycrystalline samples (size 45-63 μm) using 1064 nm radiation reveal comparable values for CsCd2Nb3O10 and nearly 5 times higher output values for RbCd2Nb3O10 with respect to potassium dihydrogen phosphate. These structures were further confirmed from transmission electron microscopy and Raman spectroscopy measurements. The optical characteristics show interesting variations to the expected photocatalytic activities. Ion-exchange reactions result in the synthesis of proton- and lithium-containing oxides, which are otherwise inaccessible by direct solid-state reactions.